Preserve & Share
Make Your Research Accessible
The final phase of the research cycle focuses on preserving and sharing your outputs—making data, code, and publications openly available, citable, and preserved for the long term.
What you’ll find here: Strategies for archiving research materials, guidance on open access publishing, tools for obtaining persistent identifiers, and approaches to maximizing research impact.
- Code Publishing (2h) - Publishing code with GitHub and Zenodo, README files, licenses
- Open Access Publishing (40 min) - Preprints, postprints, and open access options (slides)
- Introduction to Zotero (1h) - Reproducible reference management
- ORCID - Create and populate your researcher identifier
- Open Policy Finder - Check journal open access policies
Core Sharing Activities
Making research outputs accessible involves multiple interconnected practices.
Data Archiving
Common practices:
- Depositing in appropriate repositories
- Comprehensive metadata documentation
- Appropriate licensing (CC0, CC BY)
- Long-term preservation planning
Code Publishing
Researchers typically:
- Publish to GitHub with documentation
- Archive releases on Zenodo
- Assign DOIs for citation
- Add open source licenses
Open Access
Paths to openness:
- Preprints and postprints
- Gold open access journals
- Institutional repositories
- Green self-archiving
Persistent Identifiers
Ensuring findability through:
- DOIs for data and code
- ORCID for researchers
- ROR IDs for institutions
- Funder identifiers
Preservation & Sharing Strategies
Different research outputs require different sharing approaches and platforms.
Understanding when, where, and how to share research data.
FAIR Data
Making data findable, accessible, interoperable, and reusable:
- Rich metadata with keywords
- Persistent identifiers (DOIs)
- Standard file formats
- Clear usage licenses
Open Sharing
When data can be publicly shared:
- Discipline-specific repositories preferred
- General repositories (Zenodo, OSF)
- Complete anonymization required
- Comprehensive documentation
Restricted Access
For sensitive data:
- Metadata-only publication
- Data Access Agreements
- Controlled access repositories
- Institutional secure storage
Repository Selection
Finding the right repository:
- Search re3data.org for domain repositories
- Check journal requirements
- Consider long-term preservation
- Verify DOI assignment
Before Depositing Data
Essential steps:
- Complete anonymization of personal information
- README file with study description and methods
- Data dictionary with variable descriptions
- Appropriate license (CC0 or CC BY recommended)
- Ethics committee approval if required
Consult your institution’s data protection office before sharing human participant data.
Making research code citable and reusable.
GitHub to Zenodo Workflow
Standard workflow for citable code:
- Prepare Repository: Add README, license, example data
- Link to Zenodo: Enable integration via GitHub
- Create Release: Tag version (e.g., v1.0.0)
- Obtain DOI: Zenodo automatically archives and assigns DOI
- Cite: Include DOI in manuscript
Code Publishing Tutorial (2.5h) - Complete guide to publishing research code
Security Checklist
Before publishing code:
- Remove API keys, passwords, credentials
- Remove personal or participant data
- Review entire git history
- Add simulated data if needed
- Document dependencies clearly
Maximizing accessibility of publications.
Green Open Access
Free self-archiving:
- Preprints before peer review
- Postprints after acceptance
- Institutional repositories
- No publication fees
Gold Open Access
Publisher open access:
- Immediate open license publication
- Usually requires APC payment
- Check institutional agreements
- Request CC BY license
Understanding Versions
Preprint: Manuscript before peer review
- Upload at submission for early feedback
- Platforms: bioRxiv, medRxiv, arXiv, OSF Preprints
Postprint: Accepted manuscript (author’s version)
- Upload after acceptance
- Check journal policy via SHERPA/RoMEO
Published Version: Final formatted article
- Usually requires payment or agreements
Managing Costs
Free Options:
- Submit preprints to discipline servers
- Upload postprints to institutional repository
Funded Options:
- Check institutional agreements
- Contact LMU Open Access: open-access@ub.uni-muenchen.de
- Request CC BY for maximum reusability
Ensuring findability and reuse.
ORCID
Your unique researcher identifier:
- Links all publications and datasets
- Persists across institutions
- Create free at orcid.org
DOI
Digital Object Identifiers:
- Assigned by repositories
- Required for citation
- Enables impact tracking
Data Licenses
Recommended:
- CC0: Maximum reusability
- CC BY 4.0: Attribution required
- Avoid CC BY-NC (limits reuse)
Code Licenses
Common choices:
- MIT: Permissive, widely adopted
- Apache 2.0: Patent protection
- GPL-3.0: Derivatives must be open
Author Contributions
Use CRediT taxonomy to specify contributions:
- Conceptualization, Data curation, Formal analysis
- Methodology, Software, Visualization
- Writing (original draft, review & editing)
Benefits: transparent contribution tracking, proper attribution, career development.
Understanding Licensing
“When thinking about what one can, must, or should do with Open Material and Open Data, one has to differentiate on the one hand legally-enforceable rules (which are handled with legal licenses) and, on the other hand, rules and standards of the scientific community. If a piece of work is in the public domain (e.g., a CC0 license) there is no legal requirement to give attribution, but as a scientist one still has the ethical obligation to give a proper citation.”
Resources:
- Open Definition - Comprehensive list of conformant licenses for content and data
- Choose a License - Simple tool for selecting code licenses
- Creative Commons License Chooser - Select appropriate CC license for your needs
Tools & Platforms
Data Repositories
Platforms for archiving research data with persistent identifiers and long-term preservation.
Finding the right repository: Use re3data.org to search 3,000+ research data repositories by discipline, data type, and certification standards.
Zenodo
General repository, free unlimited storage, DOI assignment
Read more
Accepts all research outputs. GitHub integration, version control, communities support. Ideal for code + data packages.
OSF
Project management with integrated storage and preprints
Read more
Complete research projects, preregistrations, file versioning, collaboration tools, DOI assignment.
Dryad
Curated repository for research data
Read more
Nonprofit, open data repository. Human curation, CC0 license for maximum reuse. Integrates with many journals.
Figshare
All research outputs with visualization
Read more
Free unlimited public storage. Figures, datasets, videos, code. DOI assignment, embeddable visualizations.
Harvard Dataverse
Open source research data repository
Read more
Free data sharing. Create your own dataverse (collection). Structured metadata, DOI assignment, versioning.
Open Data LMU
LMU research data repository
Supported at LMURead more
Dedicated repository for LMU research data. DOI assignment, long-term preservation, FAIR-compliant metadata.
Code Archives
Platforms for publishing and archiving research code with version control and DOI assignment:
LRZ GitLab
Secure institutional Git hosting for active research
Supported at LMURead more
Private repositories during research. Enhanced security, CI/CD pipelines. Transfer to GitHub when ready to publish.
GitHub
Version control and collaboration platform
Tutorial availableRead more
Industry-standard Git hosting. Integrates with Zenodo for DOI assignment. Issue tracking, Actions CI/CD.
Zenodo + GitHub
Automated archiving with DOI assignment
Read more
Link repository to Zenodo, create release, DOI automatically assigned. Long-term preservation guaranteed.
Preprint Servers
Share manuscripts before peer review to get early feedback and establish priority:
OSF Preprints
Multidisciplinary preprint service
Read more
All disciplines welcome. Integration with OSF projects, flexible requirements.
bioRxiv
Biological sciences preprints
Read more
Free hosting, DOI assignment, rapid posting. Widely recognized in life sciences and neuroscience.
medRxiv
Medical and health sciences preprints
Read more
Medical research focus with health screening. DOI assignment, linked to bioRxiv infrastructure.
arXiv
Physics, mathematics, computer science
Read more
Established 1991. Moderation system, LaTeX support. Standard in quantitative fields.
Publishing Support
Tools to find open access journals, check publisher policies, and manage researcher identity:
LMU Open Access
Open access consultation and APC support
Supported at LMURead more
Contact: open-access@ub.uni-muenchen.de. APC funding, publication agreements, rights management.
DOAJ
Directory of Open Access Journals
Read more
Quality-controlled directory of peer-reviewed OA journals. Publication charges, licensing, and editorial information for 20,000+ journals.
SHERPA/RoMEO
Journal self-archiving policies
Read more
Database of publisher policies. Check what versions you can archive and under what conditions.
Open Policy Finder
Check journal OA policies
Read more
Search tool for journal policies on open access, self-archiving, and funder compliance. Check rights retention options.
ORCID
Unique researcher identifier
Read more
Free account, publication tracking, portable across institutions, integrates with repositories and publishers.
Open Access Publishing: open-access@ub.uni-muenchen.de for consultation on open access options, funding, and agreements.
Research Data Management: rdm@ub.uni-muenchen.de for repository selection, metadata standards, and preservation planning.
Resources:
Preservation Checklist
Before Publication:
At Submission:
After Acceptance:
Long-term: